Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rai1Q61818 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rai1Q61818 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rai1Q61818 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rai1Q61818 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rai1Q61818 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rai1Q61818 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.07■□□□□ 0.48
Rai1Q61818 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Zfp783-201ENSMUST00000095946 670 ntBASIC18.07■□□□□ 0.48
Rai1Q61818 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rai1Q61818 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Flg-201ENSMUST00000050758 1488 ntBASIC18.07■□□□□ 0.48
Rai1Q61818 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.07■□□□□ 0.48
Rai1Q61818 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rai1Q61818 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.07■□□□□ 0.48
Rai1Q61818 Gm5417-201ENSMUST00000079706 384 ntBASIC18.07■□□□□ 0.48
Rai1Q61818 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rai1Q61818 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.07■□□□□ 0.48
Rai1Q61818 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rai1Q61818 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.06■□□□□ 0.48
Rai1Q61818 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rai1Q61818 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Rai1Q61818 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.05■□□□□ 0.48
Rai1Q61818 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.05■□□□□ 0.48
Rai1Q61818 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rai1Q61818 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rai1Q61818 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rai1Q61818 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rai1Q61818 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rai1Q61818 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.05■□□□□ 0.48
Rai1Q61818 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rai1Q61818 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rai1Q61818 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rai1Q61818 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Rai1Q61818 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rai1Q61818 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.04■□□□□ 0.48
Rai1Q61818 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rai1Q61818 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.04■□□□□ 0.48
Rai1Q61818 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.04■□□□□ 0.48
Rai1Q61818 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Rai1Q61818 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rai1Q61818 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rai1Q61818 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rai1Q61818 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rai1Q61818 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rai1Q61818 Gm10231-201ENSMUST00000181584 441 ntBASIC18.03■□□□□ 0.48
Rai1Q61818 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Gm10175-202ENSMUST00000208752 441 ntBASIC18.03■□□□□ 0.48
Rai1Q61818 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.03■□□□□ 0.48
Rai1Q61818 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Rai1Q61818 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rai1Q61818 Gm9987-201ENSMUST00000069768 567 ntBASIC18.03■□□□□ 0.48
Rai1Q61818 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rai1Q61818 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rai1Q61818 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rai1Q61818 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Rai1Q61818 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rai1Q61818 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.02■□□□□ 0.48
Rai1Q61818 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rai1Q61818 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.02■□□□□ 0.47
Rai1Q61818 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rai1Q61818 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.01■□□□□ 0.47
Rai1Q61818 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rai1Q61818 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rai1Q61818 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rai1Q61818 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rai1Q61818 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rai1Q61818 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rai1Q61818 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rai1Q61818 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms