Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Clcn4Q61418 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.09■□□□□ 0.33
Clcn4Q61418 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.09■□□□□ 0.33
Clcn4Q61418 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.09■□□□□ 0.33
Clcn4Q61418 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.09■□□□□ 0.33
Clcn4Q61418 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clcn4Q61418 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn4Q61418 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn4Q61418 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn4Q61418 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn4Q61418 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn4Q61418 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn4Q61418 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn4Q61418 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.08■□□□□ 0.32
Clcn4Q61418 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Clcn4Q61418 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.08■□□□□ 0.32
Clcn4Q61418 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn4Q61418 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clcn4Q61418 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn4Q61418 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Clcn4Q61418 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn4Q61418 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn4Q61418 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Clcn4Q61418 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn4Q61418 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn4Q61418 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn4Q61418 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn4Q61418 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn4Q61418 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn4Q61418 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn4Q61418 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.07■□□□□ 0.32
Clcn4Q61418 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Clcn4Q61418 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn4Q61418 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn4Q61418 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.07■□□□□ 0.32
Clcn4Q61418 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Clcn4Q61418 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clcn4Q61418 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn4Q61418 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Clcn4Q61418 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Clcn4Q61418 Gm42569-201ENSMUST00000200539 472 ntBASIC17.06■□□□□ 0.32
Clcn4Q61418 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.06■□□□□ 0.32
Clcn4Q61418 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn4Q61418 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Clcn4Q61418 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.05■□□□□ 0.32
Clcn4Q61418 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.05■□□□□ 0.32
Clcn4Q61418 Gm27801-201ENSMUST00000184174 223 ntBASIC17.05■□□□□ 0.32
Clcn4Q61418 Gm42642-201ENSMUST00000200683 355 ntBASIC17.05■□□□□ 0.32
Clcn4Q61418 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clcn4Q61418 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn4Q61418 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clcn4Q61418 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clcn4Q61418 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.04■□□□□ 0.32
Clcn4Q61418 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Clcn4Q61418 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn4Q61418 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clcn4Q61418 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms