Protein–RNA interactions for Protein: Q61003

Cd6, T-cell differentiation antigen CD6, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd6Q61003 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cd6Q61003 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd6Q61003 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.25■□□□□ 0.67
Cd6Q61003 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd6Q61003 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cd6Q61003 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.25■□□□□ 0.67
Cd6Q61003 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd6Q61003 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd6Q61003 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd6Q61003 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.25■□□□□ 0.67
Cd6Q61003 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd6Q61003 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.24■□□□□ 0.67
Cd6Q61003 Gm11927-201ENSMUST00000118472 759 ntBASIC19.24■□□□□ 0.67
Cd6Q61003 Gm15565-201ENSMUST00000118890 427 ntBASIC19.24■□□□□ 0.67
Cd6Q61003 Gm13836-201ENSMUST00000121159 501 ntBASIC19.24■□□□□ 0.67
Cd6Q61003 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.24■□□□□ 0.67
Cd6Q61003 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd6Q61003 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd6Q61003 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd6Q61003 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.23■□□□□ 0.67
Cd6Q61003 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.23■□□□□ 0.67
Cd6Q61003 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd6Q61003 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd6Q61003 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd6Q61003 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cd6Q61003 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd6Q61003 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd6Q61003 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd6Q61003 Mir1199-201ENSMUST00000117015 119 ntBASIC19.22■□□□□ 0.67
Cd6Q61003 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.22■□□□□ 0.67
Cd6Q61003 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.22■□□□□ 0.67
Cd6Q61003 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.22■□□□□ 0.67
Cd6Q61003 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.22■□□□□ 0.67
Cd6Q61003 Gm37055-201ENSMUST00000191866 133 ntBASIC19.22■□□□□ 0.67
Cd6Q61003 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd6Q61003 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd6Q61003 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.22■□□□□ 0.67
Cd6Q61003 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd6Q61003 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd6Q61003 Flg-201ENSMUST00000050758 1488 ntBASIC19.22■□□□□ 0.67
Cd6Q61003 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd6Q61003 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cd6Q61003 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cd6Q61003 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.21■□□□□ 0.67
Cd6Q61003 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.21■□□□□ 0.67
Cd6Q61003 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Cd6Q61003 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.21■□□□□ 0.67
Cd6Q61003 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.21■□□□□ 0.67
Cd6Q61003 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cd6Q61003 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.21■□□□□ 0.67
Cd6Q61003 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cd6Q61003 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.21■□□□□ 0.67
Cd6Q61003 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd6Q61003 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd6Q61003 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd6Q61003 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd6Q61003 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd6Q61003 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cd6Q61003 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd6Q61003 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd6Q61003 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cd6Q61003 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cd6Q61003 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd6Q61003 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd6Q61003 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Cd6Q61003 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.19■□□□□ 0.66
Cd6Q61003 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.19■□□□□ 0.66
Cd6Q61003 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd6Q61003 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Cd6Q61003 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd6Q61003 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd6Q61003 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd6Q61003 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd6Q61003 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd6Q61003 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd6Q61003 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms