Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nr1h4Q60641 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1h4Q60641 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.69■□□□□ 0.42
Nr1h4Q60641 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.69■□□□□ 0.42
Nr1h4Q60641 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1h4Q60641 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.68■□□□□ 0.42
Nr1h4Q60641 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.68■□□□□ 0.42
Nr1h4Q60641 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.68■□□□□ 0.42
Nr1h4Q60641 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.68■□□□□ 0.42
Nr1h4Q60641 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nr1h4Q60641 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nr1h4Q60641 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nr1h4Q60641 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h4Q60641 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Nr1h4Q60641 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h4Q60641 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms