Protein–RNA interactions for Protein: Q5TIS6

Noto, Homeobox protein notochord, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NotoQ5TIS6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NotoQ5TIS6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NotoQ5TIS6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NotoQ5TIS6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NotoQ5TIS6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NotoQ5TIS6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NotoQ5TIS6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.31■□□□□ 0.04
NotoQ5TIS6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.31■□□□□ 0.04
NotoQ5TIS6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NotoQ5TIS6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NotoQ5TIS6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NotoQ5TIS6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.29■□□□□ 0.04
NotoQ5TIS6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.29■□□□□ 0.04
NotoQ5TIS6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NotoQ5TIS6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.28■□□□□ 0.04
NotoQ5TIS6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NotoQ5TIS6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Gm13146-201ENSMUST00000118508 780 ntBASIC15.27■□□□□ 0.04
NotoQ5TIS6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NotoQ5TIS6 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.27■□□□□ 0.04
NotoQ5TIS6 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.27■□□□□ 0.04
NotoQ5TIS6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.27■□□□□ 0.04
NotoQ5TIS6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NotoQ5TIS6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.27■□□□□ 0.03
NotoQ5TIS6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NotoQ5TIS6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.26■□□□□ 0.03
NotoQ5TIS6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.26■□□□□ 0.03
NotoQ5TIS6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NotoQ5TIS6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms