Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Gm26524-201ENSMUST00000192339 390 ntBASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Rab3c-203ENSMUST00000224180 967 ntBASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav2Q5R1I9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav2Q5R1I9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.79□□□□□ -0.04
Trav2Q5R1I9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav2Q5R1I9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Gm20760-201ENSMUST00000179197 648 ntBASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav2Q5R1I9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav2Q5R1I9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav2Q5R1I9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav2Q5R1I9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms