Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-1Q5R1I8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav3-1Q5R1I8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3-1Q5R1I8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms