Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav6d-4Q5R1I0 Notumos-201ENSMUST00000151998 2659 ntBASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Gm26524-201ENSMUST00000192339 390 ntBASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Rab3c-203ENSMUST00000224180 967 ntBASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav6d-4Q5R1I0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-4Q5R1I0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-4Q5R1I0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav6d-4Q5R1I0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms