Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav7d-4Q5R1H9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav7d-4Q5R1H9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7d-4Q5R1H9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-4Q5R1H9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-4Q5R1H9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-4Q5R1H9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Etf1-202ENSMUST00000180351 108 ntBASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms