Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trpm3Q5F4S9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Trpm3Q5F4S9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Trpm3Q5F4S9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Trpm3Q5F4S9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Trpm3Q5F4S9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trpm3Q5F4S9 Gm37055-201ENSMUST00000191866 133 ntBASIC23.82■■□□□ 1.4
Trpm3Q5F4S9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
Trpm3Q5F4S9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trpm3Q5F4S9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.82■■□□□ 1.4
Trpm3Q5F4S9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.82■■□□□ 1.4
Trpm3Q5F4S9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Gm18666-201ENSMUST00000190039 958 ntBASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trpm3Q5F4S9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Trpm3Q5F4S9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trpm3Q5F4S9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trpm3Q5F4S9 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.8■■□□□ 1.4
Trpm3Q5F4S9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trpm3Q5F4S9 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.8■■□□□ 1.4
Trpm3Q5F4S9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trpm3Q5F4S9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Arhgef33-211ENSMUST00000225658 473 ntBASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trpm3Q5F4S9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trpm3Q5F4S9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trpm3Q5F4S9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Trpm3Q5F4S9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trpm3Q5F4S9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trpm3Q5F4S9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trpm3Q5F4S9 Gm15565-201ENSMUST00000118890 427 ntBASIC23.78■■□□□ 1.4
Trpm3Q5F4S9 Zfp783-201ENSMUST00000095946 670 ntBASIC23.78■■□□□ 1.4
Trpm3Q5F4S9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trpm3Q5F4S9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trpm3Q5F4S9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.77■■□□□ 1.4
Trpm3Q5F4S9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trpm3Q5F4S9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trpm3Q5F4S9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trpm3Q5F4S9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC23.77■■□□□ 1.4
Trpm3Q5F4S9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trpm3Q5F4S9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trpm3Q5F4S9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC23.76■■□□□ 1.39
Trpm3Q5F4S9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.76■■□□□ 1.39
Trpm3Q5F4S9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trpm3Q5F4S9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trpm3Q5F4S9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Trpm3Q5F4S9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trpm3Q5F4S9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Trpm3Q5F4S9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC23.76■■□□□ 1.39
Trpm3Q5F4S9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC23.76■■□□□ 1.39
Trpm3Q5F4S9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.75■■□□□ 1.39
Trpm3Q5F4S9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trpm3Q5F4S9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trpm3Q5F4S9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Trpm3Q5F4S9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trpm3Q5F4S9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trpm3Q5F4S9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trpm3Q5F4S9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Gm43545-201ENSMUST00000196765 2779 ntBASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Gm11643-201ENSMUST00000119578 864 ntBASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trpm3Q5F4S9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms