Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Gm13534-201ENSMUST00000121169 513 ntBASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rnf20Q5DTM8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Gm19094-201ENSMUST00000209791 1246 ntBASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.16■■□□□ 1.14
Rnf20Q5DTM8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf20Q5DTM8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf20Q5DTM8 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.14■■□□□ 1.13
Rnf20Q5DTM8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf20Q5DTM8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
Rnf20Q5DTM8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.14■■□□□ 1.13
Rnf20Q5DTM8 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.14■■□□□ 1.13
Rnf20Q5DTM8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf20Q5DTM8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf20Q5DTM8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf20Q5DTM8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf20Q5DTM8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf20Q5DTM8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf20Q5DTM8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
Rnf20Q5DTM8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.13■■□□□ 1.13
Rnf20Q5DTM8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rnf20Q5DTM8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf20Q5DTM8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf20Q5DTM8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf20Q5DTM8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.12■■□□□ 1.13
Rnf20Q5DTM8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC22.12■■□□□ 1.13
Rnf20Q5DTM8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf20Q5DTM8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf20Q5DTM8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf20Q5DTM8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.11■■□□□ 1.13
Rnf20Q5DTM8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf20Q5DTM8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf20Q5DTM8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf20Q5DTM8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf20Q5DTM8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.1■■□□□ 1.13
Rnf20Q5DTM8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC22.09■■□□□ 1.13
Rnf20Q5DTM8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf20Q5DTM8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf20Q5DTM8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.09■■□□□ 1.13
Rnf20Q5DTM8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Rnf20Q5DTM8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf20Q5DTM8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms