Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm4Q4VBF2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm4Q4VBF2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm4Q4VBF2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm4Q4VBF2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm4Q4VBF2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm4Q4VBF2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.12■□□□□ 0.81
R3hdm4Q4VBF2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm4Q4VBF2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm4Q4VBF2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
R3hdm4Q4VBF2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Gm29257-201ENSMUST00000186115 639 ntBASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3hdm4Q4VBF2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Gm12933-201ENSMUST00000120203 872 ntBASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3hdm4Q4VBF2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Gm6211-202ENSMUST00000167849 925 ntBASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Mir5133-201ENSMUST00000174955 77 ntBASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
R3hdm4Q4VBF2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Gm7290-201ENSMUST00000104990 617 ntBASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Gm12918-201ENSMUST00000120234 636 ntBASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Gm15710-201ENSMUST00000121821 636 ntBASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Gm5075-201ENSMUST00000196916 622 ntBASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3hdm4Q4VBF2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.06■□□□□ 0.8
R3hdm4Q4VBF2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.05■□□□□ 0.8
R3hdm4Q4VBF2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms