Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trim40Q3UWA4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trim40Q3UWA4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim40Q3UWA4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim40Q3UWA4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim40Q3UWA4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.45■□□□□ 0.38
Trim40Q3UWA4 Gm9959-201ENSMUST00000068277 390 ntBASIC17.45■□□□□ 0.38
Trim40Q3UWA4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim40Q3UWA4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim40Q3UWA4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim40Q3UWA4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim40Q3UWA4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim40Q3UWA4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Serp2-204ENSMUST00000228055 705 ntBASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim40Q3UWA4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim40Q3UWA4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Trim40Q3UWA4 Fst-202ENSMUST00000223640 2612 ntBASIC17.4■□□□□ 0.38
Trim40Q3UWA4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim40Q3UWA4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim40Q3UWA4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim40Q3UWA4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim40Q3UWA4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Trim40Q3UWA4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim40Q3UWA4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim40Q3UWA4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim40Q3UWA4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms