Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brd9Q3UQU0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brd9Q3UQU0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.86■□□□□ 0.93
Brd9Q3UQU0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Brd9Q3UQU0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.86■□□□□ 0.93
Brd9Q3UQU0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Brd9Q3UQU0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brd9Q3UQU0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brd9Q3UQU0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brd9Q3UQU0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.83■□□□□ 0.93
Brd9Q3UQU0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Brd9Q3UQU0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Brd9Q3UQU0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brd9Q3UQU0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brd9Q3UQU0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Brd9Q3UQU0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Brd9Q3UQU0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Brd9Q3UQU0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Brd9Q3UQU0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Gm11249-201ENSMUST00000117071 859 ntBASIC20.82■□□□□ 0.92
Brd9Q3UQU0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.82■□□□□ 0.92
Brd9Q3UQU0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Gm2399-201ENSMUST00000104944 225 ntBASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brd9Q3UQU0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brd9Q3UQU0 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Gm5643-201ENSMUST00000117081 966 ntBASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brd9Q3UQU0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Brd9Q3UQU0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Brd9Q3UQU0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brd9Q3UQU0 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.78■□□□□ 0.92
Brd9Q3UQU0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms