Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Limch1Q3UH68 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Limch1Q3UH68 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Limch1Q3UH68 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Limch1Q3UH68 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Limch1Q3UH68 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Limch1Q3UH68 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Limch1Q3UH68 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Limch1Q3UH68 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Limch1Q3UH68 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Limch1Q3UH68 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Limch1Q3UH68 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Limch1Q3UH68 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.86■■□□□ 1.09
Limch1Q3UH68 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.86■■□□□ 1.09
Limch1Q3UH68 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Limch1Q3UH68 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.86■■□□□ 1.09
Limch1Q3UH68 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Limch1Q3UH68 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Limch1Q3UH68 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Limch1Q3UH68 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.84■■□□□ 1.09
Limch1Q3UH68 Gm38205-201ENSMUST00000192243 258 ntBASIC21.84■■□□□ 1.09
Limch1Q3UH68 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Limch1Q3UH68 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Limch1Q3UH68 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Limch1Q3UH68 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Limch1Q3UH68 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Limch1Q3UH68 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Limch1Q3UH68 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Limch1Q3UH68 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Limch1Q3UH68 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Limch1Q3UH68 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.83■■□□□ 1.09
Limch1Q3UH68 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Limch1Q3UH68 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Limch1Q3UH68 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Limch1Q3UH68 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Limch1Q3UH68 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Limch1Q3UH68 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Limch1Q3UH68 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Limch1Q3UH68 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.82■■□□□ 1.08
Limch1Q3UH68 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limch1Q3UH68 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Limch1Q3UH68 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Limch1Q3UH68 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.81■■□□□ 1.08
Limch1Q3UH68 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.81■■□□□ 1.08
Limch1Q3UH68 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Limch1Q3UH68 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.81■■□□□ 1.08
Limch1Q3UH68 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Limch1Q3UH68 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Limch1Q3UH68 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Limch1Q3UH68 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Limch1Q3UH68 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.8■■□□□ 1.08
Limch1Q3UH68 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Limch1Q3UH68 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Limch1Q3UH68 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Limch1Q3UH68 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.8■■□□□ 1.08
Limch1Q3UH68 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Limch1Q3UH68 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.8■■□□□ 1.08
Limch1Q3UH68 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.8■■□□□ 1.08
Limch1Q3UH68 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Limch1Q3UH68 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.79■■□□□ 1.08
Limch1Q3UH68 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limch1Q3UH68 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limch1Q3UH68 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms