Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.83□□□□□ -0.36
Cops9Q3U898 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.83□□□□□ -0.36
Cops9Q3U898 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cops9Q3U898 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cops9Q3U898 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 AA386476-201ENSMUST00000098781 1665 ntBASIC12.83□□□□□ -0.36
Cops9Q3U898 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cops9Q3U898 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.82□□□□□ -0.36
Cops9Q3U898 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cops9Q3U898 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cops9Q3U898 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cops9Q3U898 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.81□□□□□ -0.36
Cops9Q3U898 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cops9Q3U898 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cops9Q3U898 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cops9Q3U898 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cops9Q3U898 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Cops9Q3U898 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.81□□□□□ -0.36
Cops9Q3U898 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cops9Q3U898 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cops9Q3U898 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.8□□□□□ -0.36
Cops9Q3U898 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Cops9Q3U898 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.8□□□□□ -0.36
Cops9Q3U898 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cops9Q3U898 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.8□□□□□ -0.36
Cops9Q3U898 Gm10620-201ENSMUST00000098379 1332 ntBASIC12.8□□□□□ -0.36
Cops9Q3U898 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.8□□□□□ -0.36
Cops9Q3U898 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.8□□□□□ -0.36
Cops9Q3U898 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops9Q3U898 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops9Q3U898 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cops9Q3U898 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops9Q3U898 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops9Q3U898 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cops9Q3U898 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms