Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.8■□□□□ 0.6
Ebf1Q07802 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ebf1Q07802 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf1Q07802 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf1Q07802 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ebf1Q07802 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf1Q07802 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Ebf1Q07802 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ebf1Q07802 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.79■□□□□ 0.6
Ebf1Q07802 Gm2559-201ENSMUST00000201323 363 ntBASIC18.79■□□□□ 0.6
Ebf1Q07802 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ebf1Q07802 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.79■□□□□ 0.6
Ebf1Q07802 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf1Q07802 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf1Q07802 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ebf1Q07802 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf1Q07802 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf1Q07802 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf1Q07802 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ebf1Q07802 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.78■□□□□ 0.6
Ebf1Q07802 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf1Q07802 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.78■□□□□ 0.6
Ebf1Q07802 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf1Q07802 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf1Q07802 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf1Q07802 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf1Q07802 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf1Q07802 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ebf1Q07802 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.77■□□□□ 0.6
Ebf1Q07802 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf1Q07802 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ebf1Q07802 Gm6576-201ENSMUST00000169678 883 ntBASIC18.77■□□□□ 0.6
Ebf1Q07802 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.77■□□□□ 0.6
Ebf1Q07802 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.77■□□□□ 0.6
Ebf1Q07802 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf1Q07802 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf1Q07802 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Ebf1Q07802 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf1Q07802 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf1Q07802 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf1Q07802 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ebf1Q07802 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf1Q07802 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf1Q07802 Golph3-205ENSMUST00000228671 2842 ntBASIC18.76■□□□□ 0.59
Ebf1Q07802 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.76■□□□□ 0.59
Ebf1Q07802 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Ebf1Q07802 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.76■□□□□ 0.59
Ebf1Q07802 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.76■□□□□ 0.59
Ebf1Q07802 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf1Q07802 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf1Q07802 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf1Q07802 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.76■□□□□ 0.59
Ebf1Q07802 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf1Q07802 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf1Q07802 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf1Q07802 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf1Q07802 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf1Q07802 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.75■□□□□ 0.59
Ebf1Q07802 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf1Q07802 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.75■□□□□ 0.59
Ebf1Q07802 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf1Q07802 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.75■□□□□ 0.59
Ebf1Q07802 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf1Q07802 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Dio3-201ENSMUST00000097228 1449 ntBASIC18.74■□□□□ 0.59
Ebf1Q07802 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.74■□□□□ 0.59
Ebf1Q07802 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf1Q07802 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ebf1Q07802 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.73■□□□□ 0.59
Ebf1Q07802 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.73■□□□□ 0.59
Ebf1Q07802 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ebf1Q07802 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.73■□□□□ 0.59
Ebf1Q07802 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf1Q07802 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf1Q07802 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms