Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdx4Q07424 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Cdx4Q07424 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cdx4Q07424 Gm10849-201ENSMUST00000100397 618 ntBASIC14.34□□□□□ -0.11
Cdx4Q07424 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.34□□□□□ -0.11
Cdx4Q07424 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Gm10033-202ENSMUST00000211874 928 ntBASIC14.34□□□□□ -0.11
Cdx4Q07424 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cdx4Q07424 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cdx4Q07424 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdx4Q07424 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cdx4Q07424 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdx4Q07424 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.33□□□□□ -0.12
Cdx4Q07424 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.33□□□□□ -0.12
Cdx4Q07424 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdx4Q07424 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdx4Q07424 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.33□□□□□ -0.12
Cdx4Q07424 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cdx4Q07424 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Cdx4Q07424 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdx4Q07424 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdx4Q07424 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdx4Q07424 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Cdx4Q07424 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.31□□□□□ -0.12
Cdx4Q07424 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.31□□□□□ -0.12
Cdx4Q07424 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cdx4Q07424 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdx4Q07424 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdx4Q07424 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdx4Q07424 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdx4Q07424 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cdx4Q07424 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdx4Q07424 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Gm13234-201ENSMUST00000120010 747 ntBASIC14.3□□□□□ -0.12
Cdx4Q07424 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdx4Q07424 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.3□□□□□ -0.12
Cdx4Q07424 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdx4Q07424 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Golph3-205ENSMUST00000228671 2842 ntBASIC14.3□□□□□ -0.12
Cdx4Q07424 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdx4Q07424 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms