Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps45P97390 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vps45P97390 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps45P97390 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps45P97390 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps45P97390 Gm12527-201ENSMUST00000117967 564 ntBASIC19.22■□□□□ 0.67
Vps45P97390 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.22■□□□□ 0.67
Vps45P97390 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
Vps45P97390 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.22■□□□□ 0.67
Vps45P97390 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.22■□□□□ 0.67
Vps45P97390 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Vps45P97390 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps45P97390 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps45P97390 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps45P97390 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps45P97390 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps45P97390 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.21■□□□□ 0.67
Vps45P97390 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps45P97390 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.2■□□□□ 0.66
Vps45P97390 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Vps45P97390 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Vps45P97390 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps45P97390 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps45P97390 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps45P97390 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps45P97390 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps45P97390 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.19■□□□□ 0.66
Vps45P97390 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.19■□□□□ 0.66
Vps45P97390 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Vps45P97390 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.19■□□□□ 0.66
Vps45P97390 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.19■□□□□ 0.66
Vps45P97390 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps45P97390 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps45P97390 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps45P97390 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Vps45P97390 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.18■□□□□ 0.66
Vps45P97390 Gm13534-201ENSMUST00000121169 513 ntBASIC19.18■□□□□ 0.66
Vps45P97390 Mir7071-201ENSMUST00000184847 69 ntBASIC19.18■□□□□ 0.66
Vps45P97390 Gm5408-201ENSMUST00000197998 747 ntBASIC19.18■□□□□ 0.66
Vps45P97390 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.18■□□□□ 0.66
Vps45P97390 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps45P97390 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Vps45P97390 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
Vps45P97390 Gm7290-201ENSMUST00000104990 617 ntBASIC19.17■□□□□ 0.66
Vps45P97390 Gm12918-201ENSMUST00000120234 636 ntBASIC19.17■□□□□ 0.66
Vps45P97390 Gm15710-201ENSMUST00000121821 636 ntBASIC19.17■□□□□ 0.66
Vps45P97390 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.17■□□□□ 0.66
Vps45P97390 Gm5075-201ENSMUST00000196916 622 ntBASIC19.17■□□□□ 0.66
Vps45P97390 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.17■□□□□ 0.66
Vps45P97390 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.17■□□□□ 0.66
Vps45P97390 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.17■□□□□ 0.66
Vps45P97390 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.17■□□□□ 0.66
Vps45P97390 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.17■□□□□ 0.66
Vps45P97390 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps45P97390 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps45P97390 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps45P97390 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.16■□□□□ 0.66
Vps45P97390 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Vps45P97390 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps45P97390 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Vps45P97390 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps45P97390 Gm13168-201ENSMUST00000121771 632 ntBASIC19.16■□□□□ 0.66
Vps45P97390 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps45P97390 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.16■□□□□ 0.66
Vps45P97390 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms