Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43cP86449 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43cP86449 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43cP86449 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.3■□□□□ 0.84
Trim43cP86449 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43cP86449 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43cP86449 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43cP86449 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43cP86449 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim43cP86449 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43cP86449 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43cP86449 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43cP86449 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43cP86449 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43cP86449 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43cP86449 Nespas-201ENSMUST00000143738 1083 ntBASIC20.29■□□□□ 0.84
Trim43cP86449 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Trim43cP86449 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43cP86449 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trim43cP86449 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43cP86449 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43cP86449 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim43cP86449 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim43cP86449 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim43cP86449 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim43cP86449 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim43cP86449 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim43cP86449 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim43cP86449 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim43cP86449 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43cP86449 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43cP86449 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Trim43cP86449 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43cP86449 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43cP86449 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.27■□□□□ 0.84
Trim43cP86449 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43cP86449 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43cP86449 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43cP86449 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43cP86449 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim43cP86449 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim43cP86449 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Trim43cP86449 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Trim43cP86449 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim43cP86449 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43cP86449 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43cP86449 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43cP86449 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43cP86449 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43cP86449 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim43cP86449 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43cP86449 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43cP86449 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43cP86449 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43cP86449 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43cP86449 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43cP86449 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43cP86449 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim43cP86449 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43cP86449 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43cP86449 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43cP86449 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Trim43cP86449 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.23■□□□□ 0.83
Trim43cP86449 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43cP86449 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43cP86449 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43cP86449 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43cP86449 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43cP86449 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43cP86449 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43cP86449 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim43cP86449 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.22■□□□□ 0.83
Trim43cP86449 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43cP86449 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43cP86449 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim43cP86449 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43cP86449 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim43cP86449 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.22■□□□□ 0.83
Trim43cP86449 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.22■□□□□ 0.83
Trim43cP86449 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43cP86449 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43cP86449 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43cP86449 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.21■□□□□ 0.83
Trim43cP86449 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43cP86449 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.21■□□□□ 0.83
Trim43cP86449 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Trim43cP86449 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim43cP86449 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43cP86449 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim43cP86449 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms