Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h3bP84228 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hist1h3bP84228 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h3bP84228 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h3bP84228 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h3bP84228 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.31■□□□□ 0.2
Hist1h3bP84228 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Gm10493-201ENSMUST00000097270 612 ntBASIC16.31■□□□□ 0.2
Hist1h3bP84228 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h3bP84228 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.3■□□□□ 0.2
Hist1h3bP84228 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.3■□□□□ 0.2
Hist1h3bP84228 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Gm13234-201ENSMUST00000120010 747 ntBASIC16.3■□□□□ 0.2
Hist1h3bP84228 Gm13534-201ENSMUST00000121169 513 ntBASIC16.3■□□□□ 0.2
Hist1h3bP84228 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h3bP84228 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h3bP84228 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h3bP84228 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h3bP84228 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h3bP84228 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h3bP84228 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Hist1h3bP84228 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms