Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gbx1P82976 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.47■□□□□ 0.39
Gbx1P82976 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gbx1P82976 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Gbx1P82976 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gbx1P82976 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.47■□□□□ 0.39
Gbx1P82976 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gbx1P82976 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gbx1P82976 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gbx1P82976 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gbx1P82976 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gbx1P82976 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Gbx1P82976 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.46■□□□□ 0.39
Gbx1P82976 Gm43060-201ENSMUST00000200621 289 ntBASIC17.46■□□□□ 0.39
Gbx1P82976 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gbx1P82976 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.46■□□□□ 0.39
Gbx1P82976 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gbx1P82976 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gbx1P82976 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gbx1P82976 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gbx1P82976 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.45■□□□□ 0.38
Gbx1P82976 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gbx1P82976 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gbx1P82976 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gbx1P82976 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gbx1P82976 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gbx1P82976 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gbx1P82976 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gbx1P82976 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gbx1P82976 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.44■□□□□ 0.38
Gbx1P82976 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gbx1P82976 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gbx1P82976 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gbx1P82976 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Gbx1P82976 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gbx1P82976 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gbx1P82976 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gbx1P82976 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.44■□□□□ 0.38
Gbx1P82976 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gbx1P82976 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.44■□□□□ 0.38
Gbx1P82976 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gbx1P82976 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gbx1P82976 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gbx1P82976 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gbx1P82976 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gbx1P82976 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Gbx1P82976 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gbx1P82976 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.43■□□□□ 0.38
Gbx1P82976 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gbx1P82976 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gbx1P82976 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.43■□□□□ 0.38
Gbx1P82976 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gbx1P82976 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Gbx1P82976 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gbx1P82976 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.42■□□□□ 0.38
Gbx1P82976 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gbx1P82976 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.42■□□□□ 0.38
Gbx1P82976 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.42■□□□□ 0.38
Gbx1P82976 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.42■□□□□ 0.38
Gbx1P82976 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.42■□□□□ 0.38
Gbx1P82976 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.42■□□□□ 0.38
Gbx1P82976 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gbx1P82976 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.41■□□□□ 0.38
Gbx1P82976 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.41■□□□□ 0.38
Gbx1P82976 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.41■□□□□ 0.38
Gbx1P82976 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gbx1P82976 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Gbx1P82976 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gbx1P82976 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gbx1P82976 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gbx1P82976 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gbx1P82976 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.4■□□□□ 0.38
Gbx1P82976 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gbx1P82976 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gbx1P82976 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.4■□□□□ 0.38
Gbx1P82976 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gbx1P82976 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gbx1P82976 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms