Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.31■□□□□ 0.2
Lsm6P62313 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Lsm6P62313 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm6P62313 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.3■□□□□ 0.2
Lsm6P62313 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm6P62313 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm6P62313 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm6P62313 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm6P62313 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.3■□□□□ 0.2
Lsm6P62313 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.3■□□□□ 0.2
Lsm6P62313 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.3■□□□□ 0.2
Lsm6P62313 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Lsm6P62313 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm6P62313 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm6P62313 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm6P62313 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.29■□□□□ 0.2
Lsm6P62313 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lsm6P62313 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lsm6P62313 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm6P62313 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm6P62313 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm6P62313 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm6P62313 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm6P62313 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Lsm6P62313 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lsm6P62313 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.28■□□□□ 0.2
Lsm6P62313 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm6P62313 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lsm6P62313 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm6P62313 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lsm6P62313 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm6P62313 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm6P62313 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lsm6P62313 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm6P62313 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lsm6P62313 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm6P62313 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm6P62313 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm6P62313 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm6P62313 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Lsm6P62313 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm6P62313 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm6P62313 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.26■□□□□ 0.19
Lsm6P62313 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm6P62313 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm6P62313 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.26■□□□□ 0.19
Lsm6P62313 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm6P62313 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Lsm6P62313 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lsm6P62313 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Lsm6P62313 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Lsm6P62313 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm6P62313 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.26■□□□□ 0.19
Lsm6P62313 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.26■□□□□ 0.19
Lsm6P62313 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.26■□□□□ 0.19
Lsm6P62313 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm6P62313 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm6P62313 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm6P62313 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lsm6P62313 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm6P62313 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.25■□□□□ 0.19
Lsm6P62313 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm6P62313 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.25■□□□□ 0.19
Lsm6P62313 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.25■□□□□ 0.19
Lsm6P62313 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm6P62313 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.25■□□□□ 0.19
Lsm6P62313 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.25■□□□□ 0.19
Lsm6P62313 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm6P62313 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lsm6P62313 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm6P62313 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm6P62313 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.24■□□□□ 0.19
Lsm6P62313 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Lsm6P62313 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lsm6P62313 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.24■□□□□ 0.19
Lsm6P62313 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.24■□□□□ 0.19
Lsm6P62313 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms