Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1bP61025 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1bP61025 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cks1bP61025 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1bP61025 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1bP61025 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1bP61025 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cks1bP61025 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cks1bP61025 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cks1bP61025 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.22□□□□□ -0.29
Cks1bP61025 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.22□□□□□ -0.29
Cks1bP61025 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.22□□□□□ -0.29
Cks1bP61025 Mir6236-201ENSMUST00000184437 123 ntBASIC13.22□□□□□ -0.29
Cks1bP61025 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.22□□□□□ -0.29
Cks1bP61025 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.22□□□□□ -0.29
Cks1bP61025 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cks1bP61025 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cks1bP61025 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.21□□□□□ -0.29
Cks1bP61025 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.21□□□□□ -0.29
Cks1bP61025 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.21□□□□□ -0.29
Cks1bP61025 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.21□□□□□ -0.29
Cks1bP61025 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.21□□□□□ -0.29
Cks1bP61025 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.21□□□□□ -0.29
Cks1bP61025 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Cks1bP61025 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
Cks1bP61025 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cks1bP61025 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.21□□□□□ -0.29
Cks1bP61025 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cks1bP61025 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.21□□□□□ -0.3
Cks1bP61025 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cks1bP61025 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cks1bP61025 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1bP61025 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1bP61025 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1bP61025 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Cks1bP61025 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.2□□□□□ -0.3
Cks1bP61025 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1bP61025 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1bP61025 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cks1bP61025 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1bP61025 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.2□□□□□ -0.3
Cks1bP61025 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1bP61025 Gm43566-201ENSMUST00000196851 808 ntBASIC13.2□□□□□ -0.3
Cks1bP61025 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1bP61025 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cks1bP61025 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cks1bP61025 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.19□□□□□ -0.3
Cks1bP61025 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.19□□□□□ -0.3
Cks1bP61025 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.19□□□□□ -0.3
Cks1bP61025 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cks1bP61025 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms