Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Slc1a3P56564 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a3P56564 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Slc1a3P56564 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slc1a3P56564 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a3P56564 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc1a3P56564 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Gm45102-201ENSMUST00000207427 857 ntBASIC16.66■□□□□ 0.26
Slc1a3P56564 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.66■□□□□ 0.26
Slc1a3P56564 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Slc1a3P56564 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc1a3P56564 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.65■□□□□ 0.26
Slc1a3P56564 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.65■□□□□ 0.26
Slc1a3P56564 Golgb1-201ENSMUST00000023534 498 ntBASIC16.65■□□□□ 0.26
Slc1a3P56564 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc1a3P56564 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Slc1a3P56564 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.65■□□□□ 0.26
Slc1a3P56564 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Slc1a3P56564 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Slc1a3P56564 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Slc1a3P56564 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc1a3P56564 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc1a3P56564 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Slc1a3P56564 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a3P56564 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.64■□□□□ 0.25
Slc1a3P56564 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a3P56564 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a3P56564 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a3P56564 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a3P56564 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a3P56564 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc1a3P56564 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc1a3P56564 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Gm14117-201ENSMUST00000122417 843 ntBASIC16.63■□□□□ 0.25
Slc1a3P56564 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Slc1a3P56564 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.63■□□□□ 0.25
Slc1a3P56564 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.63■□□□□ 0.25
Slc1a3P56564 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Slc1a3P56564 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc1a3P56564 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Slc1a3P56564 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Slc1a3P56564 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc1a3P56564 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc1a3P56564 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc1a3P56564 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.62■□□□□ 0.25
Slc1a3P56564 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc1a3P56564 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc1a3P56564 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc1a3P56564 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc1a3P56564 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Slc1a3P56564 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a3P56564 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a3P56564 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.61■□□□□ 0.25
Slc1a3P56564 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.61■□□□□ 0.25
Slc1a3P56564 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a3P56564 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.61■□□□□ 0.25
Slc1a3P56564 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a3P56564 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a3P56564 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a3P56564 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a3P56564 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.61■□□□□ 0.25
Slc1a3P56564 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.61■□□□□ 0.25
Slc1a3P56564 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a3P56564 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.61■□□□□ 0.25
Slc1a3P56564 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a3P56564 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a3P56564 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a3P56564 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc1a3P56564 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms