Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm10493-201ENSMUST00000097270 612 ntBASIC16.93■□□□□ 0.3
Cdh11P55288 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh11P55288 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh11P55288 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh11P55288 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh11P55288 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh11P55288 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cdh11P55288 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh11P55288 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh11P55288 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh11P55288 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.92■□□□□ 0.3
Cdh11P55288 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cdh11P55288 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh11P55288 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Cdh11P55288 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh11P55288 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.91■□□□□ 0.3
Cdh11P55288 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh11P55288 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh11P55288 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Cdh11P55288 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh11P55288 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdh11P55288 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdh11P55288 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.91■□□□□ 0.3
Cdh11P55288 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.91■□□□□ 0.3
Cdh11P55288 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.91■□□□□ 0.3
Cdh11P55288 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh11P55288 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdh11P55288 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh11P55288 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdh11P55288 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh11P55288 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cdh11P55288 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cdh11P55288 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.9■□□□□ 0.3
Cdh11P55288 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cdh11P55288 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh11P55288 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.9■□□□□ 0.3
Cdh11P55288 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh11P55288 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdh11P55288 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh11P55288 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh11P55288 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh11P55288 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh11P55288 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh11P55288 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh11P55288 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh11P55288 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh11P55288 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.89■□□□□ 0.29
Cdh11P55288 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh11P55288 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh11P55288 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh11P55288 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.88■□□□□ 0.29
Cdh11P55288 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Cdh11P55288 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.88■□□□□ 0.29
Cdh11P55288 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.88■□□□□ 0.29
Cdh11P55288 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cdh11P55288 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh11P55288 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh11P55288 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh11P55288 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh11P55288 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cdh11P55288 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh11P55288 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.88■□□□□ 0.29
Cdh11P55288 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cdh11P55288 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.87■□□□□ 0.29
Cdh11P55288 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms