Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.81■□□□□ 0.76
NcanP55066 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NcanP55066 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NcanP55066 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NcanP55066 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
NcanP55066 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NcanP55066 Gm18032-201ENSMUST00000222541 538 ntBASIC19.8■□□□□ 0.76
NcanP55066 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.8■□□□□ 0.76
NcanP55066 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NcanP55066 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NcanP55066 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NcanP55066 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NcanP55066 Gm18959-201ENSMUST00000208954 655 ntBASIC19.79■□□□□ 0.76
NcanP55066 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NcanP55066 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NcanP55066 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NcanP55066 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NcanP55066 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.78■□□□□ 0.76
NcanP55066 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NcanP55066 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NcanP55066 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.78■□□□□ 0.76
NcanP55066 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NcanP55066 Zfp783-201ENSMUST00000095946 670 ntBASIC19.78■□□□□ 0.76
NcanP55066 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NcanP55066 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NcanP55066 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NcanP55066 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NcanP55066 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NcanP55066 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NcanP55066 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NcanP55066 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
NcanP55066 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NcanP55066 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.77■□□□□ 0.76
NcanP55066 Gm10138-203ENSMUST00000206952 366 ntBASIC19.77■□□□□ 0.76
NcanP55066 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
NcanP55066 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NcanP55066 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NcanP55066 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NcanP55066 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.77■□□□□ 0.76
NcanP55066 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NcanP55066 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NcanP55066 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NcanP55066 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NcanP55066 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.76■□□□□ 0.75
NcanP55066 Gm15375-201ENSMUST00000119510 849 ntBASIC19.76■□□□□ 0.75
NcanP55066 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.76■□□□□ 0.75
NcanP55066 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NcanP55066 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NcanP55066 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.76■□□□□ 0.75
NcanP55066 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NcanP55066 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NcanP55066 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NcanP55066 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NcanP55066 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NcanP55066 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NcanP55066 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NcanP55066 Gm6443-201ENSMUST00000203599 874 ntBASIC19.75■□□□□ 0.75
NcanP55066 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.75■□□□□ 0.75
NcanP55066 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NcanP55066 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NcanP55066 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NcanP55066 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NcanP55066 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.74■□□□□ 0.75
NcanP55066 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NcanP55066 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NcanP55066 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NcanP55066 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
NcanP55066 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NcanP55066 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NcanP55066 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NcanP55066 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NcanP55066 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NcanP55066 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NcanP55066 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NcanP55066 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NcanP55066 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NcanP55066 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NcanP55066 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NcanP55066 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NcanP55066 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NcanP55066 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.72■□□□□ 0.75
NcanP55066 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NcanP55066 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NcanP55066 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NcanP55066 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NcanP55066 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NcanP55066 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NcanP55066 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NcanP55066 Gm12382-201ENSMUST00000122005 922 ntBASIC19.71■□□□□ 0.75
NcanP55066 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.71■□□□□ 0.75
NcanP55066 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms