Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nub1P54729 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Nub1P54729 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Nub1P54729 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nub1P54729 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nub1P54729 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Nub1P54729 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nub1P54729 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nub1P54729 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.98■□□□□ 0.79
Nub1P54729 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nub1P54729 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nub1P54729 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.98■□□□□ 0.79
Nub1P54729 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Nub1P54729 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nub1P54729 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nub1P54729 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nub1P54729 Golph3-205ENSMUST00000228671 2842 ntBASIC19.98■□□□□ 0.79
Nub1P54729 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.97■□□□□ 0.79
Nub1P54729 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nub1P54729 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nub1P54729 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Gm7291-201ENSMUST00000199147 382 ntBASIC19.97■□□□□ 0.79
Nub1P54729 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nub1P54729 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nub1P54729 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nub1P54729 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.96■□□□□ 0.79
Nub1P54729 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.96■□□□□ 0.79
Nub1P54729 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Nub1P54729 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Nub1P54729 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.96■□□□□ 0.79
Nub1P54729 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nub1P54729 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nub1P54729 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.95■□□□□ 0.78
Nub1P54729 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nub1P54729 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nub1P54729 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.95■□□□□ 0.78
Nub1P54729 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nub1P54729 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nub1P54729 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Nub1P54729 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.94■□□□□ 0.78
Nub1P54729 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nub1P54729 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nub1P54729 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nub1P54729 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.93■□□□□ 0.78
Nub1P54729 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nub1P54729 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nub1P54729 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nub1P54729 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Nub1P54729 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nub1P54729 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.93■□□□□ 0.78
Nub1P54729 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nub1P54729 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nub1P54729 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Nub1P54729 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms