Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RoraP51448 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RoraP51448 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RoraP51448 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RoraP51448 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RoraP51448 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RoraP51448 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.55■□□□□ 0.4
RoraP51448 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.55■□□□□ 0.4
RoraP51448 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.55■□□□□ 0.4
RoraP51448 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RoraP51448 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RoraP51448 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RoraP51448 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RoraP51448 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RoraP51448 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RoraP51448 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RoraP51448 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RoraP51448 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.55■□□□□ 0.4
RoraP51448 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RoraP51448 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RoraP51448 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RoraP51448 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RoraP51448 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RoraP51448 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RoraP51448 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RoraP51448 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RoraP51448 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RoraP51448 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RoraP51448 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
RoraP51448 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RoraP51448 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RoraP51448 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RoraP51448 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RoraP51448 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RoraP51448 Gm37856-201ENSMUST00000191634 999 ntBASIC17.53■□□□□ 0.4
RoraP51448 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RoraP51448 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RoraP51448 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RoraP51448 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RoraP51448 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RoraP51448 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RoraP51448 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.52■□□□□ 0.4
RoraP51448 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RoraP51448 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RoraP51448 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RoraP51448 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.52■□□□□ 0.4
RoraP51448 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RoraP51448 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.52■□□□□ 0.4
RoraP51448 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RoraP51448 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.52■□□□□ 0.4
RoraP51448 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.52■□□□□ 0.4
RoraP51448 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RoraP51448 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.52■□□□□ 0.4
RoraP51448 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RoraP51448 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RoraP51448 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RoraP51448 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RoraP51448 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.52■□□□□ 0.39
RoraP51448 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RoraP51448 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.51■□□□□ 0.39
RoraP51448 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.51■□□□□ 0.39
RoraP51448 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RoraP51448 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RoraP51448 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RoraP51448 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RoraP51448 Gm8520-201ENSMUST00000186517 868 ntBASIC17.51■□□□□ 0.39
RoraP51448 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RoraP51448 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.51■□□□□ 0.39
RoraP51448 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RoraP51448 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RoraP51448 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RoraP51448 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RoraP51448 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RoraP51448 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RoraP51448 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.5■□□□□ 0.39
RoraP51448 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.5■□□□□ 0.39
RoraP51448 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RoraP51448 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RoraP51448 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RoraP51448 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RoraP51448 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RoraP51448 Gm22240-201ENSMUST00000175225 82 ntBASIC17.5■□□□□ 0.39
RoraP51448 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RoraP51448 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RoraP51448 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RoraP51448 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RoraP51448 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RoraP51448 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RoraP51448 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.5■□□□□ 0.39
RoraP51448 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RoraP51448 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.49■□□□□ 0.39
RoraP51448 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RoraP51448 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
RoraP51448 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RoraP51448 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RoraP51448 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.49■□□□□ 0.39
RoraP51448 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.49■□□□□ 0.39
RoraP51448 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RoraP51448 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms