Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gm7290-201ENSMUST00000104990 617 ntBASIC19.05■□□□□ 0.64
TubP50586 Gm12933-201ENSMUST00000120203 872 ntBASIC19.05■□□□□ 0.64
TubP50586 Gm12918-201ENSMUST00000120234 636 ntBASIC19.05■□□□□ 0.64
TubP50586 Gm15710-201ENSMUST00000121821 636 ntBASIC19.05■□□□□ 0.64
TubP50586 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TubP50586 Gm5075-201ENSMUST00000196916 622 ntBASIC19.05■□□□□ 0.64
TubP50586 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.05■□□□□ 0.64
TubP50586 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.05■□□□□ 0.64
TubP50586 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.05■□□□□ 0.64
TubP50586 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TubP50586 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TubP50586 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TubP50586 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.04■□□□□ 0.64
TubP50586 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TubP50586 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TubP50586 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TubP50586 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.03■□□□□ 0.64
TubP50586 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TubP50586 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TubP50586 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TubP50586 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TubP50586 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TubP50586 Mir5133-201ENSMUST00000174955 77 ntBASIC19.03■□□□□ 0.64
TubP50586 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TubP50586 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TubP50586 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TubP50586 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TubP50586 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TubP50586 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TubP50586 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.02■□□□□ 0.64
TubP50586 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TubP50586 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.02■□□□□ 0.64
TubP50586 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TubP50586 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TubP50586 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TubP50586 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TubP50586 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.02■□□□□ 0.64
TubP50586 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TubP50586 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TubP50586 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TubP50586 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TubP50586 Gm10602-201ENSMUST00000098239 609 ntBASIC19.02■□□□□ 0.64
TubP50586 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TubP50586 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.02■□□□□ 0.64
TubP50586 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TubP50586 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TubP50586 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TubP50586 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TubP50586 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TubP50586 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.02■□□□□ 0.63
TubP50586 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TubP50586 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TubP50586 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
TubP50586 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TubP50586 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TubP50586 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TubP50586 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TubP50586 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TubP50586 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TubP50586 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TubP50586 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TubP50586 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.01■□□□□ 0.63
TubP50586 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TubP50586 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TubP50586 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TubP50586 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TubP50586 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TubP50586 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TubP50586 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19■□□□□ 0.63
TubP50586 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TubP50586 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TubP50586 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TubP50586 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TubP50586 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TubP50586 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms