Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hnf4aP49698 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Hnf4aP49698 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Hnf4aP49698 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hnf4aP49698 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hnf4aP49698 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.02■□□□□ 0.48
Hnf4aP49698 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hnf4aP49698 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Hnf4aP49698 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hnf4aP49698 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Hnf4aP49698 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Hnf4aP49698 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Hnf4aP49698 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Hnf4aP49698 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hnf4aP49698 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Hnf4aP49698 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18■□□□□ 0.47
Hnf4aP49698 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18■□□□□ 0.47
Hnf4aP49698 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18■□□□□ 0.47
Hnf4aP49698 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18■□□□□ 0.47
Hnf4aP49698 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18■□□□□ 0.47
Hnf4aP49698 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hnf4aP49698 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hnf4aP49698 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hnf4aP49698 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hnf4aP49698 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hnf4aP49698 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.99■□□□□ 0.47
Hnf4aP49698 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.99■□□□□ 0.47
Hnf4aP49698 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.99■□□□□ 0.47
Hnf4aP49698 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.99■□□□□ 0.47
Hnf4aP49698 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hnf4aP49698 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hnf4aP49698 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hnf4aP49698 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.98■□□□□ 0.47
Hnf4aP49698 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.98■□□□□ 0.47
Hnf4aP49698 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.98■□□□□ 0.47
Hnf4aP49698 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.98■□□□□ 0.47
Hnf4aP49698 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hnf4aP49698 Reep4-203ENSMUST00000226563 1444 ntBASIC17.98■□□□□ 0.47
Hnf4aP49698 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.98■□□□□ 0.47
Hnf4aP49698 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.97■□□□□ 0.47
Hnf4aP49698 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.97■□□□□ 0.47
Hnf4aP49698 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms