Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc2P43407 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc2P43407 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.85■□□□□ 0.93
Sdc2P43407 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc2P43407 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.85■□□□□ 0.93
Sdc2P43407 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sdc2P43407 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc2P43407 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc2P43407 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc2P43407 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc2P43407 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc2P43407 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Sdc2P43407 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc2P43407 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.84■□□□□ 0.93
Sdc2P43407 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.84■□□□□ 0.93
Sdc2P43407 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.84■□□□□ 0.93
Sdc2P43407 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.84■□□□□ 0.93
Sdc2P43407 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc2P43407 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sdc2P43407 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc2P43407 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc2P43407 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc2P43407 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.84■□□□□ 0.93
Sdc2P43407 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.84■□□□□ 0.93
Sdc2P43407 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sdc2P43407 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc2P43407 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc2P43407 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc2P43407 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sdc2P43407 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.83■□□□□ 0.93
Sdc2P43407 Gm38205-201ENSMUST00000192243 258 ntBASIC20.83■□□□□ 0.93
Sdc2P43407 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.83■□□□□ 0.93
Sdc2P43407 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.83■□□□□ 0.93
Sdc2P43407 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.83■□□□□ 0.92
Sdc2P43407 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sdc2P43407 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sdc2P43407 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.82■□□□□ 0.92
Sdc2P43407 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sdc2P43407 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.82■□□□□ 0.92
Sdc2P43407 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sdc2P43407 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc2P43407 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Sdc2P43407 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.81■□□□□ 0.92
Sdc2P43407 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc2P43407 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc2P43407 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc2P43407 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc2P43407 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc2P43407 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.81■□□□□ 0.92
Sdc2P43407 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sdc2P43407 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.8■□□□□ 0.92
Sdc2P43407 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Sdc2P43407 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Sdc2P43407 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.8■□□□□ 0.92
Sdc2P43407 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.8■□□□□ 0.92
Sdc2P43407 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.8■□□□□ 0.92
Sdc2P43407 Gm43060-201ENSMUST00000200621 289 ntBASIC20.8■□□□□ 0.92
Sdc2P43407 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sdc2P43407 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sdc2P43407 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.8■□□□□ 0.92
Sdc2P43407 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sdc2P43407 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.79■□□□□ 0.92
Sdc2P43407 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sdc2P43407 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.79■□□□□ 0.92
Sdc2P43407 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Sdc2P43407 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms