Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.34■□□□□ 0.05
Hist1h1aP43275 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Hist1h1aP43275 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.33■□□□□ 0.05
Hist1h1aP43275 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hist1h1aP43275 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Hist1h1aP43275 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist1h1aP43275 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.33■□□□□ 0.04
Hist1h1aP43275 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist1h1aP43275 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist1h1aP43275 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Hist1h1aP43275 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist1h1aP43275 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist1h1aP43275 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Hist1h1aP43275 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hist1h1aP43275 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist1h1aP43275 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hist1h1aP43275 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.32■□□□□ 0.04
Hist1h1aP43275 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.32■□□□□ 0.04
Hist1h1aP43275 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.32■□□□□ 0.04
Hist1h1aP43275 Gm43137-201ENSMUST00000198052 594 ntBASIC15.32■□□□□ 0.04
Hist1h1aP43275 Spcs1-204ENSMUST00000226782 949 ntBASIC15.32■□□□□ 0.04
Hist1h1aP43275 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hist1h1aP43275 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hist1h1aP43275 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hist1h1aP43275 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.31■□□□□ 0.04
Hist1h1aP43275 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist1h1aP43275 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.3■□□□□ 0.04
Hist1h1aP43275 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.3■□□□□ 0.04
Hist1h1aP43275 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Hist1h1aP43275 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Hist1h1aP43275 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.29■□□□□ 0.04
Hist1h1aP43275 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Hist1h1aP43275 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h1aP43275 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hist1h1aP43275 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hist1h1aP43275 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms