Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Abca1P41233 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca1P41233 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca1P41233 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Abca1P41233 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.38■□□□□ 0.05
Abca1P41233 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Abca1P41233 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Abca1P41233 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Abca1P41233 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.38■□□□□ 0.05
Abca1P41233 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca1P41233 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.38■□□□□ 0.05
Abca1P41233 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca1P41233 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
Abca1P41233 Gm15565-201ENSMUST00000118890 427 ntBASIC15.37■□□□□ 0.05
Abca1P41233 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Abca1P41233 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Abca1P41233 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca1P41233 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Abca1P41233 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Abca1P41233 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca1P41233 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca1P41233 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca1P41233 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca1P41233 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Abca1P41233 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.37■□□□□ 0.05
Abca1P41233 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.37■□□□□ 0.05
Abca1P41233 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca1P41233 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Abca1P41233 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.37■□□□□ 0.05
Abca1P41233 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Abca1P41233 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.36■□□□□ 0.05
Abca1P41233 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
Abca1P41233 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.36■□□□□ 0.05
Abca1P41233 Gm2559-201ENSMUST00000201323 363 ntBASIC15.36■□□□□ 0.05
Abca1P41233 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Abca1P41233 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.36■□□□□ 0.05
Abca1P41233 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Abca1P41233 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Abca1P41233 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.36■□□□□ 0.05
Abca1P41233 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Abca1P41233 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Abca1P41233 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Abca1P41233 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.35■□□□□ 0.05
Abca1P41233 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Abca1P41233 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.35■□□□□ 0.05
Abca1P41233 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.35■□□□□ 0.05
Abca1P41233 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abca1P41233 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca1P41233 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca1P41233 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.34■□□□□ 0.05
Abca1P41233 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.34■□□□□ 0.05
Abca1P41233 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Abca1P41233 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca1P41233 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca1P41233 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Abca1P41233 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abca1P41233 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Abca1P41233 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Abca1P41233 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca1P41233 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca1P41233 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca1P41233 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca1P41233 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Abca1P41233 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Abca1P41233 Gm12896-201ENSMUST00000118430 226 ntBASIC15.33■□□□□ 0.05
Abca1P41233 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.33■□□□□ 0.05
Abca1P41233 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca1P41233 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Abca1P41233 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abca1P41233 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Abca1P41233 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Abca1P41233 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Abca1P41233 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms