Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
Fen1P39749 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Fen1P39749 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fen1P39749 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fen1P39749 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.67■□□□□ 0.58
Fen1P39749 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Fen1P39749 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Fen1P39749 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Fen1P39749 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.66■□□□□ 0.58
Fen1P39749 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Fen1P39749 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.66■□□□□ 0.58
Fen1P39749 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Fen1P39749 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.66■□□□□ 0.58
Fen1P39749 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Fen1P39749 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fen1P39749 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.65■□□□□ 0.58
Fen1P39749 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fen1P39749 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Fen1P39749 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Fen1P39749 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Fen1P39749 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Fen1P39749 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fen1P39749 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Fen1P39749 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.64■□□□□ 0.57
Fen1P39749 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fen1P39749 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.64■□□□□ 0.57
Fen1P39749 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fen1P39749 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Fen1P39749 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Fen1P39749 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Fen1P39749 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fen1P39749 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fen1P39749 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fen1P39749 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fen1P39749 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fen1P39749 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fen1P39749 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fen1P39749 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.62■□□□□ 0.57
Fen1P39749 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fen1P39749 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fen1P39749 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Fen1P39749 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fen1P39749 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.62■□□□□ 0.57
Fen1P39749 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Fen1P39749 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Fen1P39749 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fen1P39749 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fen1P39749 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fen1P39749 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Fen1P39749 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fen1P39749 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fen1P39749 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fen1P39749 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.61■□□□□ 0.57
Fen1P39749 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fen1P39749 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Fen1P39749 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.61■□□□□ 0.57
Fen1P39749 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Fen1P39749 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fen1P39749 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fen1P39749 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.61■□□□□ 0.57
Fen1P39749 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms