Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk2P38575 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk2P38575 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Upk2P38575 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.33■□□□□ 0.2
Upk2P38575 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.33■□□□□ 0.2
Upk2P38575 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.33■□□□□ 0.2
Upk2P38575 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk2P38575 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.32■□□□□ 0.2
Upk2P38575 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.32■□□□□ 0.2
Upk2P38575 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Upk2P38575 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.32■□□□□ 0.2
Upk2P38575 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.32■□□□□ 0.2
Upk2P38575 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.32■□□□□ 0.2
Upk2P38575 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Upk2P38575 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk2P38575 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Upk2P38575 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.31■□□□□ 0.2
Upk2P38575 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.31■□□□□ 0.2
Upk2P38575 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.31■□□□□ 0.2
Upk2P38575 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Upk2P38575 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk2P38575 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Upk2P38575 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.3■□□□□ 0.2
Upk2P38575 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.3■□□□□ 0.2
Upk2P38575 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Upk2P38575 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Upk2P38575 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Upk2P38575 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Upk2P38575 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Upk2P38575 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.29■□□□□ 0.2
Upk2P38575 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk2P38575 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk2P38575 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Upk2P38575 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk2P38575 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk2P38575 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Upk2P38575 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Upk2P38575 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Upk2P38575 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk2P38575 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk2P38575 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Upk2P38575 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Upk2P38575 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Upk2P38575 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Upk2P38575 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.28■□□□□ 0.2
Upk2P38575 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk2P38575 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Upk2P38575 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk2P38575 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk2P38575 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Upk2P38575 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.27■□□□□ 0.2
Upk2P38575 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Upk2P38575 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Upk2P38575 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.27■□□□□ 0.2
Upk2P38575 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Upk2P38575 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Upk2P38575 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.27■□□□□ 0.2
Upk2P38575 Gm10033-202ENSMUST00000211874 928 ntBASIC16.27■□□□□ 0.2
Upk2P38575 Gm5874-201ENSMUST00000096101 508 ntBASIC16.27■□□□□ 0.2
Upk2P38575 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms