Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sox5P35710 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox5P35710 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.31■□□□□ 0.84
Sox5P35710 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.31■□□□□ 0.84
Sox5P35710 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox5P35710 Gm8493-201ENSMUST00000196881 489 ntBASIC20.31■□□□□ 0.84
Sox5P35710 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox5P35710 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox5P35710 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox5P35710 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox5P35710 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox5P35710 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox5P35710 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sox5P35710 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sox5P35710 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Sox5P35710 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox5P35710 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox5P35710 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox5P35710 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox5P35710 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox5P35710 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sox5P35710 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox5P35710 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.29■□□□□ 0.84
Sox5P35710 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.29■□□□□ 0.84
Sox5P35710 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.29■□□□□ 0.84
Sox5P35710 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.29■□□□□ 0.84
Sox5P35710 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox5P35710 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox5P35710 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox5P35710 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sox5P35710 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox5P35710 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sox5P35710 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox5P35710 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Sox5P35710 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Sox5P35710 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox5P35710 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Sox5P35710 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.28■□□□□ 0.84
Sox5P35710 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.28■□□□□ 0.84
Sox5P35710 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sox5P35710 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sox5P35710 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox5P35710 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.28■□□□□ 0.84
Sox5P35710 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox5P35710 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox5P35710 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sox5P35710 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox5P35710 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox5P35710 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox5P35710 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox5P35710 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox5P35710 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox5P35710 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox5P35710 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox5P35710 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Sox5P35710 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.27■□□□□ 0.84
Sox5P35710 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Sox5P35710 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox5P35710 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sox5P35710 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Sox5P35710 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox5P35710 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox5P35710 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox5P35710 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox5P35710 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox5P35710 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox5P35710 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox5P35710 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox5P35710 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sox5P35710 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sox5P35710 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sox5P35710 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sox5P35710 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Sox5P35710 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox5P35710 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox5P35710 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox5P35710 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox5P35710 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Sox5P35710 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.25■□□□□ 0.83
Sox5P35710 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox5P35710 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox5P35710 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sox5P35710 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox5P35710 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Sox5P35710 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sox5P35710 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox5P35710 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox5P35710 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Sox5P35710 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox5P35710 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox5P35710 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sox5P35710 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox5P35710 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.23■□□□□ 0.83
Sox5P35710 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox5P35710 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sox5P35710 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox5P35710 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox5P35710 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sox5P35710 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Sox5P35710 Gm38205-201ENSMUST00000192243 258 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms