Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.98■□□□□ 0.15
Slc6a1P31648 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Slc6a1P31648 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Slc6a1P31648 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Slc6a1P31648 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.97■□□□□ 0.15
Slc6a1P31648 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a1P31648 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Slc6a1P31648 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
Slc6a1P31648 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc6a1P31648 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc6a1P31648 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Slc6a1P31648 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Slc6a1P31648 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Slc6a1P31648 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc6a1P31648 Gm7143-201ENSMUST00000222811 859 ntBASIC15.96■□□□□ 0.15
Slc6a1P31648 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Slc6a1P31648 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.96■□□□□ 0.15
Slc6a1P31648 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc6a1P31648 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Slc6a1P31648 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Slc6a1P31648 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Slc6a1P31648 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Slc6a1P31648 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Slc6a1P31648 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Slc6a1P31648 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.95■□□□□ 0.14
Slc6a1P31648 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
Slc6a1P31648 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.95■□□□□ 0.14
Slc6a1P31648 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc6a1P31648 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc6a1P31648 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc6a1P31648 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc6a1P31648 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.94■□□□□ 0.14
Slc6a1P31648 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc6a1P31648 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Slc6a1P31648 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc6a1P31648 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Slc6a1P31648 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc6a1P31648 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.94■□□□□ 0.14
Slc6a1P31648 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Slc6a1P31648 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc6a1P31648 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc6a1P31648 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc6a1P31648 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Slc6a1P31648 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Slc6a1P31648 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Slc6a1P31648 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.93■□□□□ 0.14
Slc6a1P31648 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Slc6a1P31648 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Gm9870-201ENSMUST00000063874 645 ntBASIC15.93■□□□□ 0.14
Slc6a1P31648 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms