Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CtgfP29268 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.33■□□□□ 0.36
CtgfP29268 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.33■□□□□ 0.36
CtgfP29268 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.33■□□□□ 0.36
CtgfP29268 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.33■□□□□ 0.36
CtgfP29268 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CtgfP29268 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtgfP29268 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtgfP29268 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtgfP29268 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.32■□□□□ 0.36
CtgfP29268 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.32■□□□□ 0.36
CtgfP29268 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CtgfP29268 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CtgfP29268 Gm12441-201ENSMUST00000121806 588 ntBASIC17.32■□□□□ 0.36
CtgfP29268 Gm26524-201ENSMUST00000192339 390 ntBASIC17.32■□□□□ 0.36
CtgfP29268 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CtgfP29268 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CtgfP29268 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.32■□□□□ 0.36
CtgfP29268 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CtgfP29268 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CtgfP29268 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CtgfP29268 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.31■□□□□ 0.36
CtgfP29268 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.31■□□□□ 0.36
CtgfP29268 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CtgfP29268 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CtgfP29268 Rab3c-203ENSMUST00000224180 967 ntBASIC17.3■□□□□ 0.36
CtgfP29268 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.3■□□□□ 0.36
CtgfP29268 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CtgfP29268 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.29■□□□□ 0.36
CtgfP29268 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CtgfP29268 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CtgfP29268 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CtgfP29268 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CtgfP29268 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.29■□□□□ 0.36
CtgfP29268 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.29■□□□□ 0.36
CtgfP29268 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CtgfP29268 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.29■□□□□ 0.36
CtgfP29268 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CtgfP29268 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
CtgfP29268 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
CtgfP29268 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CtgfP29268 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CtgfP29268 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CtgfP29268 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms