Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RxrbP28704 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RxrbP28704 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RxrbP28704 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RxrbP28704 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RxrbP28704 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RxrbP28704 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RxrbP28704 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RxrbP28704 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RxrbP28704 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
RxrbP28704 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.69■□□□□ 0.58
RxrbP28704 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RxrbP28704 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RxrbP28704 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RxrbP28704 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RxrbP28704 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RxrbP28704 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.68■□□□□ 0.58
RxrbP28704 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.68■□□□□ 0.58
RxrbP28704 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RxrbP28704 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RxrbP28704 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Gm9847-201ENSMUST00000052528 599 ntBASIC18.68■□□□□ 0.58
RxrbP28704 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RxrbP28704 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RxrbP28704 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RxrbP28704 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RxrbP28704 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RxrbP28704 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RxrbP28704 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.67■□□□□ 0.58
RxrbP28704 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.67■□□□□ 0.58
RxrbP28704 Gm8969-201ENSMUST00000199694 526 ntBASIC18.67■□□□□ 0.58
RxrbP28704 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.67■□□□□ 0.58
RxrbP28704 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RxrbP28704 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RxrbP28704 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.66■□□□□ 0.58
RxrbP28704 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RxrbP28704 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RxrbP28704 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RxrbP28704 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RxrbP28704 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RxrbP28704 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RxrbP28704 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RxrbP28704 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RxrbP28704 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RxrbP28704 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RxrbP28704 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.66■□□□□ 0.58
RxrbP28704 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RxrbP28704 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RxrbP28704 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RxrbP28704 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RxrbP28704 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RxrbP28704 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RxrbP28704 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RxrbP28704 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RxrbP28704 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
RxrbP28704 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RxrbP28704 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RxrbP28704 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RxrbP28704 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.65■□□□□ 0.58
RxrbP28704 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RxrbP28704 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RxrbP28704 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RxrbP28704 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RxrbP28704 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RxrbP28704 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RxrbP28704 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RxrbP28704 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RxrbP28704 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RxrbP28704 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RxrbP28704 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RxrbP28704 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RxrbP28704 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RxrbP28704 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RxrbP28704 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RxrbP28704 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RxrbP28704 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RxrbP28704 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RxrbP28704 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RxrbP28704 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RxrbP28704 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RxrbP28704 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RxrbP28704 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RxrbP28704 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RxrbP28704 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RxrbP28704 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.62■□□□□ 0.57
RxrbP28704 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.62■□□□□ 0.57
RxrbP28704 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RxrbP28704 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RxrbP28704 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms