Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.85■□□□□ 0.29
Cd40P27512 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cd40P27512 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.85■□□□□ 0.29
Cd40P27512 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.85■□□□□ 0.29
Cd40P27512 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Cd40P27512 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40P27512 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cd40P27512 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Golph3-205ENSMUST00000228671 2842 ntBASIC16.84■□□□□ 0.29
Cd40P27512 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Cd40P27512 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.84■□□□□ 0.29
Cd40P27512 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cd40P27512 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.84■□□□□ 0.29
Cd40P27512 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40P27512 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cd40P27512 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cd40P27512 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cd40P27512 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Cd40P27512 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.83■□□□□ 0.28
Cd40P27512 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cd40P27512 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Cd40P27512 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd40P27512 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd40P27512 Gm7291-201ENSMUST00000199147 382 ntBASIC16.83■□□□□ 0.28
Cd40P27512 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cd40P27512 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd40P27512 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.83■□□□□ 0.28
Cd40P27512 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cd40P27512 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd40P27512 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd40P27512 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cd40P27512 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cd40P27512 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cd40P27512 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.82■□□□□ 0.28
Cd40P27512 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40P27512 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Cd40P27512 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40P27512 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cd40P27512 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.81■□□□□ 0.28
Cd40P27512 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.81■□□□□ 0.28
Cd40P27512 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40P27512 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cd40P27512 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.81■□□□□ 0.28
Cd40P27512 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.81■□□□□ 0.28
Cd40P27512 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40P27512 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40P27512 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.81■□□□□ 0.28
Cd40P27512 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40P27512 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40P27512 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40P27512 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cd40P27512 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.8■□□□□ 0.28
Cd40P27512 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.8■□□□□ 0.28
Cd40P27512 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.8■□□□□ 0.28
Cd40P27512 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.8■□□□□ 0.28
Cd40P27512 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40P27512 Gm7290-201ENSMUST00000104990 617 ntBASIC16.8■□□□□ 0.28
Cd40P27512 Gm12918-201ENSMUST00000120234 636 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms