Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BdnfP21237 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
BdnfP21237 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BdnfP21237 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BdnfP21237 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BdnfP21237 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BdnfP21237 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BdnfP21237 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
BdnfP21237 Gm11421-201ENSMUST00000122124 294 ntBASIC17.76■□□□□ 0.43
BdnfP21237 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BdnfP21237 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BdnfP21237 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BdnfP21237 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BdnfP21237 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BdnfP21237 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
BdnfP21237 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
BdnfP21237 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
BdnfP21237 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.75■□□□□ 0.43
BdnfP21237 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
BdnfP21237 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BdnfP21237 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BdnfP21237 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Gm45417-201ENSMUST00000209533 758 ntBASIC17.75■□□□□ 0.43
BdnfP21237 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
BdnfP21237 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BdnfP21237 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.74■□□□□ 0.43
BdnfP21237 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.74■□□□□ 0.43
BdnfP21237 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.74■□□□□ 0.43
BdnfP21237 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.74■□□□□ 0.43
BdnfP21237 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
BdnfP21237 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
BdnfP21237 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BdnfP21237 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BdnfP21237 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BdnfP21237 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BdnfP21237 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BdnfP21237 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BdnfP21237 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BdnfP21237 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.73■□□□□ 0.43
BdnfP21237 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.73■□□□□ 0.43
BdnfP21237 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.73■□□□□ 0.43
BdnfP21237 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BdnfP21237 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BdnfP21237 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BdnfP21237 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.72■□□□□ 0.43
BdnfP21237 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
BdnfP21237 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BdnfP21237 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
BdnfP21237 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 Gm6139-201ENSMUST00000079261 882 ntBASIC17.72■□□□□ 0.43
BdnfP21237 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BdnfP21237 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BdnfP21237 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BdnfP21237 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BdnfP21237 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
BdnfP21237 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.71■□□□□ 0.43
BdnfP21237 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
BdnfP21237 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BdnfP21237 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BdnfP21237 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BdnfP21237 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BdnfP21237 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.71■□□□□ 0.42
BdnfP21237 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BdnfP21237 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
BdnfP21237 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
BdnfP21237 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.7■□□□□ 0.42
BdnfP21237 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BdnfP21237 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BdnfP21237 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BdnfP21237 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms