Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Tnfrsf9P20334 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Tnfrsf9P20334 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tnfrsf9P20334 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf9P20334 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Tnfrsf9P20334 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf9P20334 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf9P20334 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf9P20334 Gm7290-201ENSMUST00000104990 617 ntBASIC15.05■□□□□ -0
Tnfrsf9P20334 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf9P20334 Gm12918-201ENSMUST00000120234 636 ntBASIC15.05■□□□□ -0
Tnfrsf9P20334 Gm15710-201ENSMUST00000121821 636 ntBASIC15.05■□□□□ -0
Tnfrsf9P20334 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Tnfrsf9P20334 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.05■□□□□ -0
Tnfrsf9P20334 Gm5075-201ENSMUST00000196916 622 ntBASIC15.05■□□□□ -0
Tnfrsf9P20334 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.05■□□□□ -0
Tnfrsf9P20334 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Tnfrsf9P20334 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.05■□□□□ -0
Tnfrsf9P20334 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.05■□□□□ -0
Tnfrsf9P20334 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf9P20334 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf9P20334 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf9P20334 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf9P20334 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf9P20334 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Tnfrsf9P20334 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf9P20334 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf9P20334 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Tnfrsf9P20334 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.05■□□□□ -0
Tnfrsf9P20334 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Tnfrsf9P20334 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.04■□□□□ -0
Tnfrsf9P20334 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 Gm38205-201ENSMUST00000192243 258 ntBASIC15.04■□□□□ -0
Tnfrsf9P20334 Trmt13-210ENSMUST00000198454 880 ntBASIC15.04■□□□□ -0
Tnfrsf9P20334 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.04■□□□□ -0
Tnfrsf9P20334 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Tnfrsf9P20334 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf9P20334 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.03■□□□□ -0
Tnfrsf9P20334 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.03■□□□□ -0
Tnfrsf9P20334 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Tnfrsf9P20334 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf9P20334 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf9P20334 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Tnfrsf9P20334 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf9P20334 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Tnfrsf9P20334 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf9P20334 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf9P20334 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf9P20334 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf9P20334 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf9P20334 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf9P20334 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf9P20334 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.02■□□□□ -0
Tnfrsf9P20334 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.02■□□□□ -0
Tnfrsf9P20334 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Tnfrsf9P20334 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf9P20334 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.02□□□□□ -0.01
Tnfrsf9P20334 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf9P20334 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.02□□□□□ -0.01
Tnfrsf9P20334 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.02□□□□□ -0.01
Tnfrsf9P20334 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf9P20334 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf9P20334 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf9P20334 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf9P20334 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms