Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.55■□□□□ 0.72
Cd44P15379 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Cd44P15379 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.55■□□□□ 0.72
Cd44P15379 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.55■□□□□ 0.72
Cd44P15379 Gm38205-201ENSMUST00000192243 258 ntBASIC19.55■□□□□ 0.72
Cd44P15379 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd44P15379 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.54■□□□□ 0.72
Cd44P15379 Gm27454-201ENSMUST00000185090 204 ntBASIC19.54■□□□□ 0.72
Cd44P15379 Gm40848-201ENSMUST00000221998 324 ntBASIC19.54■□□□□ 0.72
Cd44P15379 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 Gm6139-201ENSMUST00000079261 882 ntBASIC19.54■□□□□ 0.72
Cd44P15379 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cd44P15379 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cd44P15379 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.53■□□□□ 0.72
Cd44P15379 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cd44P15379 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cd44P15379 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cd44P15379 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Cd44P15379 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.52■□□□□ 0.72
Cd44P15379 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.52■□□□□ 0.72
Cd44P15379 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.52■□□□□ 0.72
Cd44P15379 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cd44P15379 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.52■□□□□ 0.72
Cd44P15379 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd44P15379 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.52■□□□□ 0.72
Cd44P15379 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Cd44P15379 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cd44P15379 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.52■□□□□ 0.71
Cd44P15379 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cd44P15379 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cd44P15379 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Cd44P15379 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd44P15379 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cd44P15379 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cd44P15379 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Cd44P15379 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.5■□□□□ 0.71
Cd44P15379 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cd44P15379 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.49■□□□□ 0.71
Cd44P15379 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.49■□□□□ 0.71
Cd44P15379 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.49■□□□□ 0.71
Cd44P15379 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms