Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.12■□□□□ 0.81
RaraP11416 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RaraP11416 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.12■□□□□ 0.81
RaraP11416 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RaraP11416 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RaraP11416 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.12■□□□□ 0.81
RaraP11416 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RaraP11416 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RaraP11416 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RaraP11416 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.11■□□□□ 0.81
RaraP11416 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.1■□□□□ 0.81
RaraP11416 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.1■□□□□ 0.81
RaraP11416 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.1■□□□□ 0.81
RaraP11416 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RaraP11416 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RaraP11416 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RaraP11416 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.1■□□□□ 0.81
RaraP11416 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RaraP11416 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RaraP11416 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RaraP11416 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RaraP11416 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.09■□□□□ 0.81
RaraP11416 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.09■□□□□ 0.81
RaraP11416 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RaraP11416 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RaraP11416 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RaraP11416 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RaraP11416 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RaraP11416 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RaraP11416 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RaraP11416 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RaraP11416 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.08■□□□□ 0.81
RaraP11416 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.08■□□□□ 0.81
RaraP11416 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.08■□□□□ 0.81
RaraP11416 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RaraP11416 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RaraP11416 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RaraP11416 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RaraP11416 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RaraP11416 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RaraP11416 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.08■□□□□ 0.8
RaraP11416 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RaraP11416 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RaraP11416 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.07■□□□□ 0.8
RaraP11416 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RaraP11416 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RaraP11416 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RaraP11416 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RaraP11416 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.07■□□□□ 0.8
RaraP11416 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RaraP11416 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.07■□□□□ 0.8
RaraP11416 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RaraP11416 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.07■□□□□ 0.8
RaraP11416 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.07■□□□□ 0.8
RaraP11416 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RaraP11416 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RaraP11416 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RaraP11416 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RaraP11416 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.07■□□□□ 0.8
RaraP11416 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RaraP11416 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RaraP11416 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RaraP11416 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RaraP11416 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RaraP11416 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RaraP11416 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.06■□□□□ 0.8
RaraP11416 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RaraP11416 Gm43060-201ENSMUST00000200621 289 ntBASIC20.06■□□□□ 0.8
RaraP11416 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RaraP11416 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RaraP11416 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms