Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.48□□□□□ -0.09
Ccl1P10146 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccl1P10146 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ccl1P10146 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ccl1P10146 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ccl1P10146 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl1P10146 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccl1P10146 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccl1P10146 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccl1P10146 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccl1P10146 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccl1P10146 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccl1P10146 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccl1P10146 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Ccl1P10146 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl1P10146 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccl1P10146 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccl1P10146 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccl1P10146 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccl1P10146 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccl1P10146 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccl1P10146 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccl1P10146 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Ccl1P10146 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Ccl1P10146 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccl1P10146 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl1P10146 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccl1P10146 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Ccl1P10146 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccl1P10146 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccl1P10146 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccl1P10146 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl1P10146 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccl1P10146 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms