Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Gm6420-201ENSMUST00000193885 723 ntBASIC16.15■□□□□ 0.18
PtcraP0C6B2 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.15■□□□□ 0.18
PtcraP0C6B2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.15■□□□□ 0.18
PtcraP0C6B2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PtcraP0C6B2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.14■□□□□ 0.17
PtcraP0C6B2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Gm26571-201ENSMUST00000181399 666 ntBASIC16.14■□□□□ 0.17
PtcraP0C6B2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PtcraP0C6B2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.14■□□□□ 0.17
PtcraP0C6B2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PtcraP0C6B2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PtcraP0C6B2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PtcraP0C6B2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PtcraP0C6B2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PtcraP0C6B2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.13■□□□□ 0.17
PtcraP0C6B2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PtcraP0C6B2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PtcraP0C6B2 Gm42569-201ENSMUST00000200539 472 ntBASIC16.13■□□□□ 0.17
PtcraP0C6B2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PtcraP0C6B2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.13■□□□□ 0.17
PtcraP0C6B2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.13■□□□□ 0.17
PtcraP0C6B2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PtcraP0C6B2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.12■□□□□ 0.17
PtcraP0C6B2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PtcraP0C6B2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PtcraP0C6B2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PtcraP0C6B2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PtcraP0C6B2 Nespas-201ENSMUST00000143738 1083 ntBASIC16.11■□□□□ 0.17
PtcraP0C6B2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.11■□□□□ 0.17
PtcraP0C6B2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PtcraP0C6B2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PtcraP0C6B2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PtcraP0C6B2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Gm7290-201ENSMUST00000104990 617 ntBASIC16.1■□□□□ 0.17
PtcraP0C6B2 Gm12918-201ENSMUST00000120234 636 ntBASIC16.1■□□□□ 0.17
PtcraP0C6B2 Gm15710-201ENSMUST00000121821 636 ntBASIC16.1■□□□□ 0.17
PtcraP0C6B2 Gm27405-201ENSMUST00000184201 112 ntBASIC16.1■□□□□ 0.17
PtcraP0C6B2 Gm5075-201ENSMUST00000196916 622 ntBASIC16.1■□□□□ 0.17
PtcraP0C6B2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.1■□□□□ 0.17
PtcraP0C6B2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.1■□□□□ 0.17
PtcraP0C6B2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PtcraP0C6B2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms