Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.31■□□□□ 0.2
P04224 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
P04224 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
P04224 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.31■□□□□ 0.2
P04224 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.31■□□□□ 0.2
P04224 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04224 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
P04224 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
P04224 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.3■□□□□ 0.2
P04224 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.3■□□□□ 0.2
P04224 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
P04224 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
P04224 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04224 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04224 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04224 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04224 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04224 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.29■□□□□ 0.2
P04224 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04224 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
P04224 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04224 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P04224 Fst-202ENSMUST00000223640 2612 ntBASIC16.29■□□□□ 0.2
P04224 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.29■□□□□ 0.2
P04224 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
P04224 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
P04224 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P04224 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
P04224 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.28■□□□□ 0.2
P04224 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.28■□□□□ 0.2
P04224 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 BC021767-201ENSMUST00000126387 1716 ntBASIC16.28■□□□□ 0.2
P04224 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04224 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04224 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
P04224 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P04224 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04224 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04224 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04224 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04224 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04224 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P04224 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
P04224 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.27■□□□□ 0.2
P04224 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P04224 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P04224 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
P04224 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
P04224 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.26■□□□□ 0.19
P04224 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
P04224 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
P04224 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
P04224 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04224 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms