Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sp1O89090 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sp1O89090 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sp1O89090 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.87■□□□□ 0.61
Sp1O89090 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sp1O89090 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp1O89090 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sp1O89090 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sp1O89090 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp1O89090 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sp1O89090 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp1O89090 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp1O89090 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp1O89090 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sp1O89090 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp1O89090 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Sp1O89090 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sp1O89090 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp1O89090 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sp1O89090 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sp1O89090 Notumos-201ENSMUST00000151998 2659 ntBASIC18.85■□□□□ 0.61
Sp1O89090 Gm12896-201ENSMUST00000118430 226 ntBASIC18.85■□□□□ 0.61
Sp1O89090 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.85■□□□□ 0.61
Sp1O89090 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sp1O89090 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp1O89090 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp1O89090 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sp1O89090 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp1O89090 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Sp1O89090 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sp1O89090 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.84■□□□□ 0.61
Sp1O89090 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp1O89090 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp1O89090 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sp1O89090 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sp1O89090 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Sp1O89090 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp1O89090 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp1O89090 Gm27275-201ENSMUST00000184318 272 ntBASIC18.83■□□□□ 0.6
Sp1O89090 Gm2559-201ENSMUST00000201323 363 ntBASIC18.83■□□□□ 0.6
Sp1O89090 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp1O89090 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sp1O89090 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp1O89090 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp1O89090 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp1O89090 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp1O89090 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp1O89090 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp1O89090 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sp1O89090 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp1O89090 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp1O89090 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sp1O89090 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp1O89090 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.82■□□□□ 0.6
Sp1O89090 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sp1O89090 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.82■□□□□ 0.6
Sp1O89090 Trmt13-210ENSMUST00000198454 880 ntBASIC18.82■□□□□ 0.6
Sp1O89090 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp1O89090 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp1O89090 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp1O89090 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.81■□□□□ 0.6
Sp1O89090 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 Dio3-201ENSMUST00000097228 1449 ntBASIC18.81■□□□□ 0.6
Sp1O89090 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp1O89090 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp1O89090 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.8■□□□□ 0.6
Sp1O89090 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp1O89090 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.8■□□□□ 0.6
Sp1O89090 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp1O89090 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp1O89090 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.79■□□□□ 0.6
Sp1O89090 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sp1O89090 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sp1O89090 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp1O89090 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.78■□□□□ 0.6
Sp1O89090 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms