Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syn1O88935 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Syn1O88935 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syn1O88935 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Syn1O88935 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syn1O88935 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Syn1O88935 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syn1O88935 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syn1O88935 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.19■□□□□ 0.66
Syn1O88935 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.19■□□□□ 0.66
Syn1O88935 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syn1O88935 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syn1O88935 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syn1O88935 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syn1O88935 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syn1O88935 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syn1O88935 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.18■□□□□ 0.66
Syn1O88935 Gm23634-201ENSMUST00000175071 91 ntBASIC19.18■□□□□ 0.66
Syn1O88935 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Syn1O88935 Gm21814-202ENSMUST00000203277 873 ntBASIC19.18■□□□□ 0.66
Syn1O88935 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Syn1O88935 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Syn1O88935 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Syn1O88935 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Syn1O88935 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.17■□□□□ 0.66
Syn1O88935 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syn1O88935 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syn1O88935 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Syn1O88935 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Syn1O88935 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syn1O88935 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syn1O88935 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syn1O88935 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Syn1O88935 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Syn1O88935 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Syn1O88935 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Syn1O88935 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Syn1O88935 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syn1O88935 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.15■□□□□ 0.66
Syn1O88935 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syn1O88935 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Syn1O88935 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syn1O88935 Gm9103-201ENSMUST00000119371 405 ntBASIC19.15■□□□□ 0.66
Syn1O88935 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
Syn1O88935 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syn1O88935 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syn1O88935 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Syn1O88935 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Syn1O88935 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syn1O88935 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syn1O88935 Gm33142-201ENSMUST00000193913 867 ntBASIC19.14■□□□□ 0.65
Syn1O88935 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.14■□□□□ 0.65
Syn1O88935 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.14■□□□□ 0.65
Syn1O88935 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.14■□□□□ 0.65
Syn1O88935 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Syn1O88935 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Syn1O88935 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syn1O88935 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Syn1O88935 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syn1O88935 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Syn1O88935 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Syn1O88935 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.13■□□□□ 0.65
Syn1O88935 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Syn1O88935 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syn1O88935 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms